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cit-bioinfo's Projects

blcasubtyping icon blcasubtyping

Transcriptomic tools to classify bladder tumours according to six published molecular classifications : Baylor, UNC, MDA, Lund, CIT-Curie, TCGA

buildconsensus icon buildconsensus

Building a consensus classification system from series of classification systems

consensusmibc icon consensusmibc

Transcriptomic classifier for Muscle-Invasive Bladder Cancer

mmcp-counter icon mmcp-counter

Murine version of MCP-counter, a tool to estimate the immune and stromal composition of heterogeneous tissue, from transcriptomic data

ms.liverk icon ms.liverk

Molecular classification of hepatocellular carcinoma samples

smap icon smap

SMAP: sequencing patient-derived xenografts

tcga_paad_survival icon tcga_paad_survival

Survival analysis of gene expression in the curated TCGA pancreatic adenocarcinoma dataset.

wisp icon wisp

Weighted In Silico Pathology: a novel approach to assess intra-tumoral heterogeneity

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