Compilation issue on MacOS

[civisanalytics]

Compilation issue on MacOS

[beckermr]

I made an issue upstream - conda-forge/glmnet-feedstock#3.

Looking at the conda package, I cannot divine why...

[beckermr]

I don't know about these issues, but a conda package for this would probably be a good idea.

Ignoring compiler warnings is not great practice, but also not crazy. Does the code actually compile? Does it ever throw an error, or do you just get warnings?

[JWarmenhoven]

Indeed, I forgot to mention that the package does not compile. I updated my initial comment.

[JWarmenhoven]

I will try installing with conda-forge:
https://github.com/conda-forge/glmnet-feedstock

[beckermr]

Ahhh cool. I did not know that existed!

[JWarmenhoven]

I did not either until today.
It installs in the correct conda environment...

$ conda list | grep glm
glmnet                    2.0.0                   np113_0    conda-forge

...but I cannot import the glmnet module.

---------------------------------------------------------------------------
ModuleNotFoundError                       Traceback (most recent call last)
<ipython-input-35-52c1c0e49750> in <module>()
----> 1 import glmnet as gln

ModuleNotFoundError: No module named 'glmnet'

[beckermr]

I am getting this too. It looks like it is installing the libs to the python 2.7 site packages directory instead of 3.6 for me.

$ ls miniconda3/envs/civis/lib/python2.7/site-packages/
_glmnet.so              glmnet/                 glmnet-2.0.0.dist-info/ 

[JWarmenhoven]

Yep...same here. (ends up in python 2.7 site-packages )
Good catch!

[beckermr]

Cool. I put in a fix to the conda package. Hopefully it gets merged soon.

[beckermr]

The new conda forge package has merged. I am closing this. If you still have trouble, please feel free to open an issue here or on the conda forge feedstock!

[edoroth]

I still have an issue importing glmnet. Conda is installing correctly into python 3.8 packages, but I can't understand why it isn't able to import... there is a glymnet.py file inside of the glmnet_python folder which was installed.

import glmnet_python File "/usr/local/Caskroom/miniconda/base/lib/python3.8/site-packages/glmnet_python/__init__.py", line 12, in <module> from .cvglmnet import cvglmnet File "/usr/local/Caskroom/miniconda/base/lib/python3.8/site-packages/glmnet_python/cvglmnet.py", line 203, in <module> from glmnet import glmnet ImportError: cannot import name 'glmnet' from 'glmnet' (/usr/local/Caskroom/miniconda/base/lib/python3.8/site-packages/glmnet/__init__.py)

[drealtoni]

@edoroth were you able to get a solution to this