Comments (3)
Hello!
Sorry for my delayed reply! It sounds like an easy fix.
I will definitely add this for the next update, thank you for the suggestion!
The update, I hope, will happen soon with the most recent version of Trinity and a few new features I am working on.
Cheers,
Clément
from dnapipete.
Hi @clemgoub !
Was this implemented? I recently tried DNApipeTE and it looks like my output headers are not "RepeatMasker ready".
This is an easy fix for me to do myself, but which of the accessory files would you recommend to insert the "#Class/Order" tag?
from dnapipete.
Hi Andreas,
Are you referring to the dnaPipeTE contigs, located in the file Trinity.fasta
?
You can find the annotation given to these contigs in the file reads_per_component_and_annotations
If there is no annotation at all, do you have a file Trinity.fasta.out
and if yes, does it have any lines?
From that, we will be able to troubleshoot!
Cheers,
Clément
from dnapipete.
Related Issues (20)
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- FileNotFoundError: [Errno 2] HOT 12
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- dnaPT_landscapes.sh running error HOT 1
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- ERROR:main:Error reading file: This file cannot be read by this version of famdb.py. HOT 10
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- FATAL message when attempting to rerun program HOT 2
- Error in (function (file = if (onefile) "Rplots.pdf" else "Rplot%03d.pdf", : cannot open file 'Rplots.pdf' HOT 1
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