crbs Goto Github PK

arduino-onewire

Arduino One-Wire library

arduino-temperature-control-library

autodockjobgenerator

AutoDockWrapper is a command line java application that generates Auto Dock jobs from a set of ligands and receptors that can be run directly or via Panfish on compute clusters.

beanstalk_console

Admin console for Beanstalk queue server

biological_imaging_methods_ontology

A structured controlled vocabulary of sample preparation, visualization and imaging methods used in biomedical research.

cached-latex-plugin

Cached LaTeX Plugin for Atlassian Confluence

cdeep3m

Please go to https://github.com/CRBS/cdeep3m2 for most recent version

cdeep3m2

Plug-and-Play deep learning for image segmentation of large-scale microscopy data

chm_singularity

Generates Singularity image for Cascaded Hierarchical Model (CHM)

chmutil

Utilities to run Cascaded Hierarchical Model (CHM) jobs on cluster of computers

cil_image_viewer

This image viewer utilizes the Leaflet library and the CodeIgniter PHP library for browsing the high definition images.

cil_metadata_forms

This app provides the metadata input forms for the CIL.

cil_php_website

Display data using Elasticsearch and utilize the bootstrap layout

cil_rs

cildata_util

CIL Data Extraction Utility to download/convert data from legacy CIL website

cildatatiler

core_firewall

Core firewall module. This module sets up the basic firewall. This module also is a wrapper/supplement for the main firewall module provided from forge.puppetlabs.com

cracen

CRAC Environmental Notification

crbs.github.com

cws

CRBS Workflow Service -- Is a REST Service to enable execution of Kepler Workflows via Panfish

etspecutil

A set of utilities to run ET-SPEC (formerly known as Etphantom) from the command line

image_viewer_data_converter

Scripts for converting images to the compatible format for the CIL Image Viewer

morphome

Run organelle-specific morphometric analysis and visualization workflows by interfacing with Amira.

motd

Puppet MOTD Module

multicolor_em

ImageJ plugin to overlay color-coded nanoSIMS/EELS chemical maps over the Conventional EM images

nbcrtrainingvm

Contains a vagrant configuration to generate a virtual machine with software needed for NBCR summer training class

ncmirtools

Commandline tools for NCMIR

nifmon

openldap

panfish

Multicluster job submission