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canopy_class_climate

sensitivity analysis of eastern forest climate sensitivities

ed2

Ecosystem Demography Model

ed2_erelax

ED2 version with relaxed leaf energy budget requirements

ed_paleon

Everything needed to run perform the PalEON ED runs

ed_process_output

Code for processing and plotting the output from the ED2 model

ed_processing

Scripts used to process ED output for PalEON Project

establishment_sdms

growth-models

Maximum Likelihood models of tree growth in the Central Appalachians

initial_ensemble

Scripts for generating an ensemble of initial conditions for data assimilation runs. These are developed for ED2, but will hopefully be generalizeable to other ecosystem & vegetation models.

linkages

The original version of Linkages can be downloaded at http://daac.ornl.gov/MODELS/guides/LINKAGES.html. I have made some modifications to the original code. I will include a description of each change in each commit.

met_utils

Scripts developed to facilitate downloading and interacting with various met products. Some of these are custom versions of scripts that eventually made their way into Pecan (pecanproject.org)

metdownscaling_manuscript

Repository of met downscaling workflow plus analyses for manuscript

paleon-npp

Code for calculating annual NPP from tree rings

paleon_mip_code

Code used in the Paleon Model Inter-comparison Project

pecan

The Predictive Ecosystem Analyzer (PEcAn) is an integrated ecological bioinformatics toolbox.

r_functions

Various functions that come in handy; mostly working with GAMMs

rnpn

Wrapper to the National Phenology Network database API