cyrilcros Goto Github PK

argo

Argo Workflows: Get stuff done with Kubernetes.

argo-cd

Declarative continuous deployment for Kubernetes.

argo-helm

ArgoProj Helm Charts

bioconda-recipes

Conda recipes for the bioconda channel.

cellxgene

An interactive explorer for single-cell transcriptomics data

cellxgene-gateway

Cellxgene Gateway from Novartis customizations

cilium

eBPF-based Networking, Security, and Observability

circleci-dockerfiles

Dockerfiles for CircleCI's convenience images, built via https://github.com/circleci/circleci-images

cloudmap

CloudMap: A Cloud-Based Pipeline for Analysis of Mutant Genome Sequences. Genetics, 2012

cloudmap-rework

CloudMap variant mapping

cloudmap2

More accurate mapping than the original cloudmap.

cloudmap3

cvmfs-csi

dockerfiles

dotfiles-cyril

Dotfiles for vim / tmux

galaxy-cvmfs-csi-helm

A Helm chart deploying CVMFS-CSI on Kubernetes with a default configuration for Galaxy repositories

galaxy-helm

Minimal setup required to run Galaxy under Kubernetes

gitpod

Gitpod automates the provisioning of ready-to-code development environments.

gpu-jupyter

Leverage the flexibility of Jupyterlab through the power of your NVIDIA GPU to run your code from Tensorflow and Pytorch in collaborative notebooks on the GPU.

harbor-helm

The helm chart to deploy Harbor

helm-chart

Helm charts for Dask

kubespawner

Kubernetes spawner for JupyterHub

pristina-cell-type-atlas

Data exploration from https://github.com/scbe-lab/pristina-cell-type-atlas/fork

rook

Storage Orchestration for Kubernetes

samap

SAMap: Mapping single-cell RNA sequencing datasets from evolutionarily distant organisms.

segworm

SegWorm is Matlab code from Dr. Eviatar Yemini built as part of the WormBehavior database (http://wormbehavior.mrc-lmb.cam.ac.uk/)

shinycellmodded

Shiny Interactive Web Apps for Single-Cell Data - playing with the graphics

storage-k8s

tierpsy-tracker

Multi-Worm Behaviour Tracker

useful-fragments

Snippets for R/Python reuse