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2018-05-30-krscourseinbiomedicalimageanalysisandvisualization

Kitware Course in Biomedical Image Analysis and Visualization: ITK

dcmqi

dcmqi (DICOM for Quantitative Imaging) is a free, open source library that can help with the conversion between imaging research formats and the standard DICOM representation for image analysis results

dictol

DICTOL - A Dictionary Learning Toolbox in Matlab and Python

freect_wfbp

Fast, lightweight, GPU-based, CT Image Reconstruction

gpu-distance-driven-projection-backprojection

itk

Insight Toolkit (ITK) -- Official Repository

medpy

Medical image processing in Python

rtk

Reconstruction Toolkit

sacs_tip2014

The Matlab code for Self-adaptively Weighted Co-saliency (SACS) Detection

savu

Tomography Reconstructon Pipeline

scikit-learn

scikit-learn: machine learning in Python

scirun

SCIRun is a Problem Solving Environment (PSE), for modeling, simulation and visualization of scientific problems. This is version 5, the Qt/Boost/C++11 conversion of SCIRun v4.

seg3d

Seg3D is a free volume segmentation and processing tool developed by the NIH Center for Integrative Biomedical Computing at the University of Utah Scientific Computing and Imaging (SCI) Institute.

smqtk

Python toolkit for pluggable algorithms and data structures for multimedia-based machine learning.

sprokit

Stream Processing ToolKit

telesculptor

TeleSculptor: Aerial Photogrammetry Application powered by KWIVER

tiepvupsu.github.io

My Machine Learning blog

tigre

TIGRE: Tomographic Iterative GPU-based Reconstruction Toolbox

tomogpi_for_astra

This Matlab plugin for the Astra toolbox delivers 3D reconstruction algorithms for Computed Tomography. Theses algorithms are representative of bayesian framework used at the Inverse Problem Group at L2S (University Paris Saclay). GPL-v3 license

tomopy

Tomographic Reconstruction in Python

trex

A toolbox for tomography reconstruction using proximal algorithms based on the ASTRA toolbox.

ufo-ir

Iterative reconstruction for UFO

uploader-agent

uploader-web

viscl

Computer Vision GPU acceleration with OpenCL