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car-price-scraper

a tool to scrape car prices with details from multiple online car sales sites

cluster_align

a tiny bash script to cluster .fasta files at 99% identity with vsearch --cluster_fast, and align all the centroids with mafft.

cluster_analysis

cluster_analysis

contamination_checker

checks for contamination

copy-excel-paste-markdown

Copy a table in Excel (or other spreadsheet programs) and paste it as a Markdown table

davidmatten

davidmatten

disease_visualizer

A project to visualize disease, pathogens, viruses, bacteria and outbreaks on a maps interface, with selectable filters and options like year, kingdom, transmission method.

eva

fasta_tools

a few tools for dealing with fasta files

fastatools

a few tools for dealing with fasta files

glycan_detection

glycan_detection

glycan_positional_plotter

Given a .csv file of positions which are occupied across sequences for multiple sequences, we are able to produce a plot assist with visualizing these positions.

intro_to_git

intro_to_vc

ipy_notebook

testing ipython notebook with nbviewer

list_of_monitised_open_source_projects

I like open source, but its not always simple to monitise an open source project. This repo is dedicated to collecting examples of how others have successfully done this.

mmed

MMED 2014 working directory

motifbinner

open_data_set

django website to host epi data sets

pid_analysis

PID_analysis

plotting_with_jitter

plotting_with_jitter

pyfilesystem_test

testing out creating an in memory file system strictly from within python.

pypear

python .csv file comparison GUI application.

python-novice-gapminder

Introduction to Python for non-programmers using gapminder data

r_course

R course hosted by SACEMA 2014

real_time_fact_check

A project to detect truth in real time.

reference_numberer

reference_numberer

sampling_from_fasta

Sample from a fasta file.

seq_counter

Very simple sequence counter. Counts the number of sequences in a fasta file, using biopython and SeqIO

staged-recipes

A place to submit conda recipes before they become fully fledged conda-forge feedstocks