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aidaqc

An automated and simple tool for fast quality analysis of animal MRI

brainchop

Brainchop: In-browser 3D MRI rendering and segmentation

brainimagenet

clinicalbrainlab.github.io

Website of ClinicalBrainLab at NTU, Singapore

dcm2niix

dcm2nii DICOM to NIfTI converter: compiled versions available from NITRC

fid-a

Toolbox for simulation and processing of in-vivo magnetic resonance spectroscopy (MRS) data

fsl_mrs

Mirror of the FSL-MRS gitlab repository

gannet

Gannet is a free, open-source MATLAB-based software toolkit for analyzing edited 1H magnetic resonance spectroscopy (MRS) data.

hl-hgat

Heterogeneous Graph Convolutional Neural Network via Hodge-Laplacian

mriqual

A Matlab toolbox for examining the quality of structural (SNR) and functional (tSNR, SFNR) MRI

mrqy

MRQy is a quality assurance and checking tool for quantitative assessment of magnetic resonance imaging (MRI) data.

mrs-voxel-plot

Code for creating MRS voxel and spectra figures

mrs_mri_libs

Contains libraries for reading, writing and analysing Magnetic Resonance Spectroscopy and Imaging (MRS & MRI) data.

mrs_t2fit

Determine T2 relaxation times of MRS metabolites

mrsdeidentificationtools

Tools to remove protected health information (PHI) from magnetic resonance spectroscopy data.

neospec

osprey

All-in-one toolbox for processing of magnetic resonance spectroscopy data.

ox-bart

BART interoperability with GE Healthcare's Orchestra library

pfile-tools

GE P-File Utilities

pysoher

Random bits of working and example python code for science and GUI applications

qmri

Quantitative Magnetic Resonance Imaging

quiqianalysisscript

Analysis scripts allowing the insertion of a quality index into the analysis of MRI data

spec2nii

Multi-format in vivo MR spectroscopy conversion to NIFTI

suspect

MRS processing tools

uswlesion

Unified Segmentation for lesioned brain