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which jellyfish version about kraken HOT 3 CLOSED

derrickwood avatar derrickwood commented on July 17, 2024
which jellyfish version

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Comments (3)

ressy avatar ressy commented on July 17, 2024

Hi Michal,

I'm setting up an environment to run Kraken also, and trying to figure this out. When I installed the latest Kraken release (0.10.5-beta) I saw that the manual says it requires Jellyfish version 1 and explicitly not version 2. I installed 1.1.11 since that's the latest of version 1 that exists. For me, Kraken stopped complaining to me about Jellyfish so I assumed it was happy with it, though I'm seeing some errors when building a custom database. (Not sure if that's related though.)

So, I'll be curious to know if there are any more specific requirements for the Jellyfish version, but version 1 is what the documentation says for the latest kraken release.

Jesse

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ressy avatar ressy commented on July 17, 2024

Never mind, I was just forgetting to add the taxonomy when setting up the custom database. I can confirm Jellyfish 1.1.11 works for me for kraken-build.

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mictadlo avatar mictadlo commented on July 17, 2024

Thank you, for me too.

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