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Hi there, Iโ€™m Dezerae.

I am a cell biologist ๐Ÿฆ  working to uncover the molecular drivers ๐Ÿงช of neurodegenerative diseases like Alzheimer's, Parkinson's and Motor Neuron Disease ๐Ÿง . My work has taken me to the intersection of wet-lab biology ๐Ÿ”ฌ and data science ๐Ÿ’ป, and as a self-taught pythonista ๐Ÿ I am always looking for new things to learn ๐ŸŽ“. Head here to find out a little more about my science ๐Ÿ‘ฉโ€๐Ÿ”ฌ, otherwise read on for more about my code creations ๐Ÿ‘ฉโ€๐Ÿ’ป.

For a detailed list of my publications, you can find my full CV here. If you're more interested in the code, below are some of the open-access repositories that accompany recent manuscripts I've been involved in.

proteome_solubility inclusion-characterisation proteome-stability organellar-proteostasis malaria-virulence

Outside serious science stories, I love the challenge of bringing data exploration and visualisation to new arenas using my amateur coding skills.

tsla pears investigators

As the lines between biology and big data blur, researchers are having to find ever-evolving best practices for organising and curating their research output. Here are some templates I use to organise my day-to-day analysis!

experiment analysis manuscript_writing manuscript_writing

That's all for now. Found something useful, or want to get in touch? You can always find me on twitter or drop me an note. Otherwise, thanks for stopping by!

Dezerae Cox's Projects

gen_utils icon gen_utils

A collection of utility functions for processing, analysing and plotting generic tabular data

investigator-grants-2020 icon investigator-grants-2020

Host repository containing streamlit app for investigating funding outcomes of NHMRC Investigator Grants 2020. Find the app at investigators2020.herokuapp.com

keggutils icon keggutils

Utils for working with KEGG data on NetworkX

lexy_toolbox icon lexy_toolbox

Small collection of image quantitation scripts for analysis of repurposed versions of the light-inducible nuclear export system (LEXY) optogenetic toolkit

proteomicsutils icon proteomicsutils

A collection of utility functions for processing, analysing and plotting proteomic data

student-metrics-analysis-platform icon student-metrics-analysis-platform

Streamlit platform to analyse student academic and pastoral performance over time, generating summary statistics and data visualisations. Find the app at pears-platform.herokuapp.com

time-series-labelling-app icon time-series-labelling-app

Streamlit platform providing a โšก powerfully simply method for manual classification of time series training datasets.

utils_cell-culture icon utils_cell-culture

Collection of tools for analysing images and flow cytometry data associated with general tissue culture tasks

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