donaldsonlab Goto Github PK

blackwhitecage

This chamber has an open-topped half painted white and an enclosed half painted black

cleversys_scripts

python scripts for parsing cleversys output

cleversyssummaryrearranger

To rearrange the summary file from Cleversys and put it in a usable format

dlc_helper

Designed to making setting up a markerless pose estimation of user-defined features with deep learning for all animals, including humans

documents

A repo to house various documents used by the lab.

donaldsondlc

Using markerless pose estimation to quantify mating bouts.

fiberphotometry

home_cage

Project Development for the Home Cage Experiment and Environment

imaging-paper

Code and data related the imaging paper, "A Neuronal Signature for Monogamous Reunion".

lickometer

Initial Lickometer Upload

makenzie_operant

monogamousreunion

This repository houses the analytical code for the paper, "A neuronal signature for monogamous reunion".

npm-analysis-inprogress

Where we will publish the fiber pho analysis

operant-cage

phat

A flexible open-source GUI-driven toolkit for photometry analysis

pierce2023_currentbiology

ppt-chamber

Files to fabricate Partner Preference Test chambers

rampcage

Development for the Ramp Cage with a wheel, IR beam break, and servo brake

separationrnaseq

tilt_cage

Development for the tilting choice chamber

ui-lab-capture

An interface designed to make the scientists job easier by providing a simple, yet effective way of setting up their cameras and starting their data collection.

vole_surgery_registry