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10x-scatac-2019

Publication Page for Satpathy*, Granja* et al 2019

2021-march-advanced-topics-in-single-cell-rna-seq-vdj

An in-depth look at VDJ analysis with single cell RNA-Seq data. Participants must already be familiar with single cell RNA-Seq analysis.

3c_tutorial

Step by step command-line tutorial to process Hi-C data

allhic

A package to scaffolding polyploidy or heterozygosis genome using Hi-C data

apt-cyg

Apt-cyg, an apt-get like tool for Cygwin

awesome

Awesome resources on Bioinformatics, data science, machine learning, programming language (Python, Golang, R, Perl) and miscellaneous stuff.

awesome-pipeline

A curated list of awesome pipeline toolkits inspired by Awesome Sysadmin

awesome-shiny-extensions

Awesome R packages that offer extended UI or server components for the R web framework Shiny

awesome-single-cell

Community-curated list of software packages and data resources for single-cell, including RNA-seq, ATAC-seq, etc.

awesome-streamlit

The purpose of this project is to share knowledge on how awesome Streamlit is and can be

basic-browser

bioinformatics-resources

c9-python-getting-started

Sample code for Channel 9 Python for Beginners course

cellbrowser

Python pipeline and Javascript scatter plot library for single-cell datasets, http://cellbrowser.rtfd.org

chatgpt-next-web

One-Click to deploy well-designed ChatGPT web UI on Vercel. 一键拥有你自己的 ChatGPT 网页服务。

chatpaper

Use ChatGPT to summarize the arXiv papers. 全流程加速科研，利用chatgpt进行论文总结+润色+审稿+审稿回复

chia-pet2

a versatile and flexible pipeline for analysing different variants of ChIA-PET data

chia-pet_tool_v3

ChIA-PET, HiChIP, PLAC-Seq data analysis, with linker detection, linker filter, or restriction process for HiChIP, mapping, call cluster and visulization

chia-pipe

ChIA-PIPE: A fully automated pipeline for comprehensive ChIA-PET data analysis and visualization

chip-seq-analysis

ChIP-seq analysis notes from Tommy Tang

chromscape

ChromSCape (Single-Cell Chromatin Landscape profiling) : Analysis of single-cell Epigenomics in a Shiny App

circos-pipeline

circos pipeline

clusterprofiler

:bar_chart:statistical analysis and visualization of functional profiles for genes and gene clusters

cv

My pagedown rendered CV

datacolor

DataColor: Unveiling Biological Data Relationships through Distinctive Color Mapping

datascience-box

Data Science Course in a Box

dna-seq-analysis

my notes on whole exome and whole genome sequencing analysis

dongwei1220

Wei Dong's Github profile

dongwei1220.github.io

dongwei1220的个人博客

dscatac_analysis_code

Analysis repository for "Droplet-based combinatorial indexing for massive scale single-cell epigenomics"