dongzehe Goto Github PK
Name: Dongze He
Type: User
Company: University of Maryland, College Park
Bio: PhD student in Computational biology at the Unversity of Maryland
Location: DMV
Dongze He's Projects
alevin-fry
🐟 🔬🦀 alevin-fry is an efficient and flexible tool for processing single-cell sequencing data, currently focused on single-cell transcriptomics and feature barcoding.
alevinqc
Create QC and summary reports for Alevin output
all-programming-e-books-pdf
A Curated List Of Programming Books For C, C++ , Python, JavaScript, NodeJs, ReactJs, Web, JQuery, Flask, Dom, Angular, CSS, HTML for beginners, intermediate, advanced and experts
bloom-filter-implementation
This repository is for bloom filter and block bloom filter implementation
book
:books: All programming languages books
celloracle
This is the alpha version of the CellOracle package
chrombpnet
Bias factorized, base-resolution deep learning models of chromatin accessibility (chromBPNet)
codedaddies_list
dropletutils
Clone of the Bioconductor repository for the DropletUtils package.
fishgill
filter BAM file and convert it to RAD
fishpond
Differential transcript and gene expression, as well as helper functions for working with Salmon, alevin, and alevin-fry data.
genomicranges
GenomicRanges in Python
libgff
A simple GFF/GTF parsing library in C++
minnow
poly-radar
protocol-estuary
pyroe
roers
rust-tutorials
The slides and examples used in UMD CMSC388Z -- programming in rust
salmon
🐟 🍣 🍱 Highly-accurate & wicked fast transcript-level quantification from RNA-seq reads using selective alignment
sc-shc
Significance analysis for clustering single-cell RNA-sequencing data
scvelo
RNA Velocity generalized through dynamical modeling
simpleaf
A rust framework to make using alevin-fry even simpler
simpleaf_citeseq_nextflow
A nextflow workflow for processing CITE-seq data using simpleaf
single-cell-best-practices
This project is work in progress! https://www.sc-best-practices.org
succinct-structure
CMSC858D succinct structure assigment
the-result-if-you-are-stopped-by-police
Predicting the result if you are stopped by police in Montana today by your car's color, your gender and age.
usefulaf
Useful scripts and tools related to alevin-fry
Recommend Projects
-
React
A declarative, efficient, and flexible JavaScript library for building user interfaces.
-
Vue.js
🖖 Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.
-
Typescript
TypeScript is a superset of JavaScript that compiles to clean JavaScript output.
-
TensorFlow
An Open Source Machine Learning Framework for Everyone
-
Django
The Web framework for perfectionists with deadlines.
-
Laravel
A PHP framework for web artisans
-
D3
Bring data to life with SVG, Canvas and HTML. 📊📈🎉
-
Recommend Topics
-
javascript
JavaScript (JS) is a lightweight interpreted programming language with first-class functions.
-
web
Some thing interesting about web. New door for the world.
-
server
A server is a program made to process requests and deliver data to clients.
-
Machine learning
Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.
-
Visualization
Some thing interesting about visualization, use data art
-
Game
Some thing interesting about game, make everyone happy.
Recommend Org
-
Facebook
We are working to build community through open source technology. NB: members must have two-factor auth.
-
Microsoft
Open source projects and samples from Microsoft.
-
Google
Google ❤️ Open Source for everyone.
-
Alibaba
Alibaba Open Source for everyone
-
D3
Data-Driven Documents codes.
-
Tencent
China tencent open source team.