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covid-19-vaccination-public

Essential analysis code for the predictors of COVID-19 vaccination uptake study

crombetter

Helper script for checking Cromwell jobs

dalys_code

drugs-persistence-adherence

Genetic and environmental determinants of drug purchasing behaviour

endpoint-liability

Project using machine learning to transform binary GWAS endpoints into continuous liability between 0 and 1

family-ehr-graphs

Graph representation learning with GNNs for predicting disease risk from family EHRs

finngan

finregistry-data

FinRegistry data preprocessing scripts

finregistry-matrices

Scripts to generate endpoint, drug, and socioeconomic-demographic matrices in FinRegistry

finregistry-xgboost

Code for training xgboost models using the FinRegistry matrices as input

finregistry.github.io

Documentation for FinRegistry

finregistry_detailed_longitudinal_and_endpoint_generation

finregistry_pedigree

genobias

gmap-retrieval

A library to retrieve Google Street View images, satellite images and place data using Google Map APIs

gnn_family_pedigree

google-map

gwasbot

h2-finngen

Pipeline to calculate SNP-heritability in Finngen using stratified LDscore regression

icci

This is an R package that calculates the Charlson Comorbidity Index (CCI) on longitudinal ICD data, using the R package `comorbidity`.

jump1998

kela-kanta-reliability

lifetime-reproductive-success

metadata

lookup tables for variable codes

mhr_prediction

mosaic-loss-of-chromosome-x

ontology-pattern-matching

Pattern matching scripts made for mapping ontologies to Finngen endpoints.

parentalaids_t1d

query_tool

riskdemo