Daniele Silvestro's Projects
Age estimation from zircon samples
Bayesian inference of trait evolution under a “fossilized” Brownian motion.
Estimation of climatic variables using GDGT data and neural networks
A program for estimating extinction probability and date for a given set of species, based on IUCN threat assessments
Fast estimation of immigration, birth and death rates from large datasets using reversible jump MCMC
This repository includes Bayesian implementations of the MuSSE and ClaSSE methods. The use of (half-Cauchy or Exponential) hyper-priors on the rate parameters allows to control for overparameterization.
Forward individual-based simulations of evolution to link microevolutionary processes to macroevolution
Bayesian neural networks using Numpy and Scipy
Probabilistic estimation of the source of origin of sediments
PyRate is a program to estimate speciation, extinction, and preservation rates from fossil occurrence data using a Bayesian framework.
raxmlGUI 2.0 is now available: A new graphical interface for RAxML
Clade age estimation using a Bayesian Brownian bridge model
Train and run neural networks in Python