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dsun2's Projects

algorithm-exercise icon algorithm-exercise

Data Structure and Algorithm notes. 数据结构与算法/leetcode/lintcode题解/

bionda icon bionda

The biomarker database BIONDA performs text mining tasks using a dictioanry approach to identify diseases and poteincial biomarkers (lncRna, proteins, mirna and genes) in Europe PMC abstracts. The RE is sentence-based.

bionlp-corpus icon bionlp-corpus

Repository used to collect biomedical corpus on the Internet!

clusterduck icon clusterduck

Disease Clustering from Literature Based on Minimal Training Data

cocoscore icon cocoscore

CoCoScore: context-aware co-occurrence scores for text mining applications

noctua icon noctua

Graph-based modeling environment for biology, including prototype editor and services

penner icon penner

PENNER: Pattern-enhanced Nested Named Entity Recognition in Biomedical Literature (BIBM'18)

personalized-cancer-diagnosis icon personalized-cancer-diagnosis

Applying various machine learning classification techniques on a dataset which contains around 3.3K datapoints of Gene ( Gene causing cancer ), Variations ( Variations in the architecture of amino acids or variations in protein-protein interactions ) and TEXT ( Medical Literature which will help in classifying the type of cancer) . Here our task…

ppaxe icon ppaxe

Text mining tool to retrieve protein-protein interactions from the scientific literature.

pubtator icon pubtator

Retrieve and process PubTator annotations

stanza icon stanza

Official Stanford NLP Python Library for Many Human Languages

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