ecological-complexity-lab Goto Github PK

cancer-networks

covid19_vaccine_model

crispr_networks

emln

An R package for handling and manipulating multilayer network data, mainly for ecological networks

infomap_ecology_package

Package with functions to handle network data and run Infomap, inspired by ecological networks

lab_website

Our lab website

metabolic_corrs_networks_analysis

sharon's project- creating networks of correlations between metabolites in different bacteria strains (before/after evolution) and analyzing them to catch the effect of evolution

network-navigator

Interactive hierarchical network navigator

plasmid_multilayer_networks

Data and scripts for analysis in Shapiro et al., "Multilayer Networks of Plasmid Genetic Similarity Reveal Potential Pathways of Gene Transmission"

poll_seed-disp_multilayer_patagonia

Codes and data to

rumen_microbiome_structure

this is a reiteration of microbiome_structure_v2 with cleaner folder tree and fixed intralayer edge weights.

sequential_lp

We present a temporal optimal link prediction method that is based on the stacking link prediction method.