apnea_dynamics_toolbox

The sleep apnea dynamics toolbox implemented in Matlab

cnn_spectrogram_algorithm

A method to classify spectrograms from raw EEG data using a convolutional neural network

common_oscillator_models

Code repository of implementing the Common Oscillator Model

compass

COMPASS: an open-source, general-purpose software toolkit for computational psychiatry

dppm

Matlab pipeline for simulating dynamical networks and evaluating dynamic community tracking methods, including CPM, MMM and DPPM

eden-kramer-lab

Website

eden-kramer-lab.github.io

example_repository

An exemplar repository demonstrating elements of a public facing code library

glm-cfc

A GLM based approach to measure CFC

glm_course

gmm_pointprocess

Closed Form Solution for 2D Replay Decoder Using Gaussian Mixture Models

loren-frank-data-format--description

A repo containing a description of the various data types files used in Loren Frank's lab

loren_frank_data_processing

Python tools for reading in data from Loren Frank's lab

modeling_pfc_ca1_neurons

mog_tools

Tools for simulating place fields and linearizing W-track. We also include visualization tools.

multi-dimensional-decoder

Efficient Decoding of Multi-dimensional Signals from Population Spiking Activity Using a Gaussian Mixture Particle Filter

parametriccontinuousphaseestimation

Continuous Phase Estimation

poptrt

Multiunit goodness of fit testing using the time rescaling theorem.

project-perfect-predictor

project-spline-endpoints

rate_adjustment_for_spike_coherence

An implementation of the spike-rate adjustment method from Aoi et al. (2015) for comparing spike-field and spike-spike coherences.

regularized_glm

Tools for fitting a generalized linear model with a L2 or difference penalty

replay_classification

State space models for categorization of replay content from multiunit spiking activity. Deng et al. 2016

replay_identification

A semi-latent state-space model that combines movement, LFP, and ensemble spiking information to identify periods of replay and decode its content in real time. Long Tao et al., unpublished.

replay_trajectory_classification

State space models for decoding hippocampal trajectories and determining their type using sorted or clusterless data

replay_trajectory_paper

ripple_detection

Tools for identifying sharp wave ripple events using LFPs

seizure-waves-validation

spectral_connectivity

Frequency domain estimation and functional and directed connectivity analysis tools for electrophysiological data

spectral_rhythm_detector