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๐Ÿ‘‹ Hi,

I am a research scientist and I regularly write code for data analysis for my experiments.

  • For microscopy image processing and analysis I use MATLAB and the Java-based image analysis software, ImageJ.
  • For bioinformatics analysis (data from RNA sequencing) I use R/RStudio, and data processing toolkits run via the Linux and Windows command lines.

My older repositories include code I wrote for practice when learning programming. My newer repositories include code I wrote for my own data analysis at work.

๐Ÿ’ผ Programming Skills:

โœ๏ธ Expert Contributor to LinkedIn Collaborative Articles

Invited as an expert to contribute to the following articles:

๐Ÿ† Top Programming Voice Badge, September 2023

LinkedIn has awarded me the "Top Programming Voice" badge. This exclusive recognition is only given to noteworthy contributors in specialised fields. The badge symbolises not just my active contributions but also their perceived value in the professional community.

๐Ÿ“ซ How to reach me:

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๐Ÿ† Github Profile Trophies:


๐Ÿ“ˆ GitHub Stats

Stats



eleni-chr

Dr Eleni Christoforidou's Projects

24-well-plate-confluency-holes icon 24-well-plate-confluency-holes

3D printer instructions for a piece of plastic that sticks underneath a 24-well tissue culture plate. Each well on the plate has 4 holes through which the cell confluency can be measured.

approximate_e icon approximate_e

Computes Euler's number. Instead of going to infinity, the function stops at the smallest k for which the approximation differs from exp(1) (i.e., the value returned by MATLABโ€™s built-in function) by no more than the positive scalar, delta, which is the input argument.

centuries icon centuries

Takes a positive integer smaller than or equal to 3000 representing a year and returns a character array with the century the given year falls into in roman numerals.

circular_primes icon circular_primes

The function finds the number of circular prime numbers smaller than the input number.

colocalisation icon colocalisation

MATLAB function that calculates the percentage of colocalisation between two colour channels (red-green, red-blue, green-blue) in an RGB image obtained by a confocal microscope.

cyclotron icon cyclotron

Returns the energy of a positively charged isotope of hydrogen when it escapes a particle accelerator, and the number of times the isotope enters two vacuum chambers, after a voltage is applied to it.

day_counter icon day_counter

Returns the number of Mondays that fell on the first day of the month in any given year since 1776.

day_diff icon day_diff

The function returns the difference between the ages of two children in days, based on their dates of birth.

dial icon dial

Takes as input argument a character array of length 16 or less that includes only letters and digits and returns a telephone number as a uint64.

digit_counter icon digit_counter

Takes the name of a text file and returns the number of digits that the file contains.

digit_sum icon digit_sum

Sum the individual digits of an input number recursively

edgy icon edgy

Trace outlines of image

eligible icon eligible

The function decides whether a university applicant is eligible for admission based on GRE scores.

estimationerrorplot icon estimationerrorplot

Find the mean squared error between a prediction and a target vector, the Pearson's correlation and significance p-value, and the range of the data used to draw the diagonal of the plot.

exp_average icon exp_average

The function computes the โ€œexponentially weighted moving averageโ€ of a sequence of scalars. The input sequence is provided to the function one element at a time and the function returns the current average each time.

fare icon fare

The function computes the bus fare one must pay in a given city based on the distance travelled.

find_zero icon find_zero

The function finds an x that lies in the range from x1 to x2 such that after the command, y=f(x), is executed inside the function find_zero, y is approximately zero as defined by abs(y)<1e-10.

grader icon grader

Compare results of two functions

gradientascent_complex icon gradientascent_complex

This function performs gradient ascent, a first-order iterative optimisation algorithm for finding the maximum of a function. This algorithm uses a complex function.

gradientascent_simple icon gradientascent_simple

This function performs gradient ascent, a first-order iterative optimisation algorithm for finding the maximum of a function. This algorithm uses a relatively simple function.

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