Kaan Ihsan Eskut's Projects
Open source code for AlphaFold.
Burrow-Wheeler Aligner for short-read alignment (see minimap2 for long-read alignment)
Copy number variant detection from targeted DNA sequencing
A genome completeness evaluation tool based on miniprot
DeepVariant is an analysis pipeline that uses a deep neural network to call genetic variants from next-generation DNA sequencing data.
Config files for my GitHub profile.
a blog hosted on GitHub Pages
Lightning-fast and Powerful Code Editor written in Rust
A versatile pairwise aligner for genomic and spliced nucleotide sequences
a short snakemake workflow to analyze bulk RNAseq data
a work-in-progress k-mer counter written in Rust
Tools (written in C using htslib) for manipulating next-generation sequencing data
The TRate program computes "rate" of each transcript according to given coverage file.