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Plotting on variables or cases about ggord HOT 1 CLOSED

fawda123 avatar fawda123 commented on September 13, 2024
Plotting on variables or cases

from ggord.

Comments (1)

fawda123 avatar fawda123 commented on September 13, 2024

Hi, here's an example using var_sub:

library(ggord)
library(ade4)
library(FactoMineR)

# dataset and ordination
data(tea, package = 'FactoMineR')
tea <- tea[, c('Tea', 'sugar', 'price', 'age_Q', 'sex')]
ord <- MCA(tea[, -1], graph = FALSE)

# regular
ggord(ord, tea$Tea)

# using var_sub
ggord(ord, tea$Tea, var_sub = c('p_upscale', '+60'))

Please provide a reproducible example if you're still having problems... or maybe I'm misinterpreting the problem. var_sub only removes vectors from the plot and does not change the underlying ordination. I think the better way to do this is to rerun the ordination with subsets of the original data, then plot.

Thanks,

Marcus

from ggord.

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