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Cactusolo avatar Cactusolo commented on August 11, 2024 1

Ok, the update complete when I have to update the system :P

image

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josephwb avatar josephwb commented on August 11, 2024

Hrm. I run the command with no issues:

$ pxrmt -t backbone.tre -f Clade1_2_backbone.txt 
(Anemoclema_glaucifolium:20.6542950000000012,((((Clematis_reticulata:7.3544389999999993,Clematis_armandi:7.3544389999999993):0.942963,Clematis_smilacifolia:8.2974019999999999):0.531348,((Clematis_macropetala:2.2186910000000002,Clematis_sibirica:2.2186910000000002):3.2330570000000001,(((Clematis_repens:2.2258589999999998,Clematis_otophora:2.2258589999999998):1.7191780000000001,(Clematis_tibetana:2.918361,Clematis_glauca:2.918361):1.026675):0.454329,((Clematis_viridis:2.714744,Clematis_fruticosa:2.714744):0.946418,Clematis_songarica:3.661162):0.738204):1.0523819999999999):3.3770020000000001):0.536311,(((Clematis_rehderiana:4.6840479999999998,(Clematis_lasiandra:3.2502040000000001,Clematis_leschenaultiana:3.2502040000000001):1.4338439999999999):4.3432060000000003,((Clematis_aureolata:6.2135980000000002,Clematis_pilulifera:6.2135980000000002):2.7349100000000002,(((Clematis_brevicaudata:1.8090520000000001,Clematis_gratopsis:1.8090520000000001):0.504865,(Clematis_peterae:1.8200229999999999,Clematis_gouriana:1.8200229999999999):0.493894):0.355531,(Clematis_heracleifolia:1.984143,(Clematis_tubulosa:1.7610589999999999,(Clematis_speciosa:1.494645,Clematis_psliandra:1.494645):0.266414):0.223084):0.6853050000000001):6.2790600000000003):0.078746):0.155058,(Clematis_montana:2.5714389999999998,Clematis_chrysocoma:2.5714389999999998):6.6108729999999998):0.182749):11.2892349999999997);

I am using pxrmt v1.3. I did an overhaul a while ago. Is your version up-to-date?

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Cactusolo avatar Cactusolo commented on August 11, 2024

Thanks for reminding! @josephwb

Indeed, the version on my end is an older one v1.1 from conda platform. I'll try to install it manually if I can mange all the environments and dependencies. :P

I'll let you know.

Miao

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josephwb avatar josephwb commented on August 11, 2024

Ok. Sorry for the troubles. I cannot think what the problem might be ¯\(ツ)

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