fplaza Goto Github PK
Name: Florian Plaza Oñate
Type: User
Company: INRAE MetaGenoPolis
Bio: Microbiome data scientist
Location: France
Name: Florian Plaza Oñate
Type: User
Company: INRAE MetaGenoPolis
Bio: Microbiome data scientist
Location: France
C++ thread safe bitvector implementation
A fast and sensitive gapped read aligner
CAMISIM: Simulating metagenomes and microbial communities
Compute large correlation matrix with BLAS routines
Rarefies OTUs or genes raw abundance profiles to even sequencing depth across samples.
Compute relative gene abundance from raw read counts
Program that converts files from csfasta format to fasta and the other way around.
Set of tools to manipulate and compute statistics on FASTA files
An ultra-fast all-in-one FASTQ preprocessor (QC/adapters/trimming/filtering/splitting/merging...)
Tool that computes statistics on sequencing data.
GTDB-Tk: a toolkit for assigning objective taxonomic classifications to bacterial and archaeal genomes.
A fast multi-threaded k-mer counter
Fast and frugal disk based k-mer counter
Kraken taxonomic sequence classification system
MetaPhlAn is a computational tool for profiling the composition of microbial communities from metagenomic shotgun sequencing data
Fork of the canopy clustering algorithm of Nielsen et al.
motus - a tool for marker gene-based OTU (mOTU) profiling
PanPhlAn is a strain-level metagenomic profiling tool for identifying the gene composition of individual strains in metagenomic samples
pb-metagenomics-tools
Compute large correlation matrix with BLAS routines
A declarative, efficient, and flexible JavaScript library for building user interfaces.
🖖 Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.
TypeScript is a superset of JavaScript that compiles to clean JavaScript output.
An Open Source Machine Learning Framework for Everyone
The Web framework for perfectionists with deadlines.
A PHP framework for web artisans
Bring data to life with SVG, Canvas and HTML. 📊📈🎉
JavaScript (JS) is a lightweight interpreted programming language with first-class functions.
Some thing interesting about web. New door for the world.
A server is a program made to process requests and deliver data to clients.
Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.
Some thing interesting about visualization, use data art
Some thing interesting about game, make everyone happy.
We are working to build community through open source technology. NB: members must have two-factor auth.
Open source projects and samples from Microsoft.
Google ❤️ Open Source for everyone.
Alibaba Open Source for everyone
Data-Driven Documents codes.
China tencent open source team.