feature request: opening particles from single tomogram

[jmdobbs]

feature request: opening particles from single tomogram

[hvdrosa]

Hi Joe,

I also wanted to use the same thing today, and I found a workaround to be able to use the micrograph name as a selector.

So basically, instead of rlnMicrographName ArtiaX reads them as rlnTomoName (see

ArtiaX/src/io/RELION/RELIONParticleData.py

Line 87 in c741a63

'rlnTomoName': [],

).

So if you modify your starfile 'sed -i "s#rlnMicrographName#rlnTomoName#" your_filename.star', you will be able to select by micrograph/tomogram.

Still, it's going to be a slider selector like the other selectors (it would be really nice to have this as a dropdown menu for this specific one), but it should already be way easier than having to split your starfile by tomogram.
Another option is to make a fork and change this line to rlnMicrographName if you don't want to do this every time.

Hope it helps you and others!

Best,
Higor
PS. Btw, thanks a lot to the devs for this amazing tool!

[jmdobbs]

Hey Higor,

That is indeed a nice workaround! I second your suggestion about the dropdown menu as well :)

Best,
Joe.