Fredrick Kebaso's Projects
16S Intermediate Bioinformatics training manuals
Repo Containing the Scripts, results, and report from the Accreditation Exercise by icipe H3ABioNet node.
This repo collects the list of learning online resources related to microbiome computational science and tools.
De novo Long-read Genome Assembly Pipeline
Genome annotation with AUGUSTUS
Run AUGUSTUS gene prediction in parallel
A curated list of nextflow based pipelines
Lima - Demultiplex Barcoded PacBio Samples
The biggest collection of R books (and maybe later some other resources too)
The repository contains information on my internship at Icipe and all the documents that I used in the internship.
Managing the Bioinformatics Internship, 2020.
BITACORA: A Bioinformatics tool for gene family annotation
convert a blast output to a bed file
A repo for Orthofinder in CGRB BUG
Pipelines, code and ressources for creating a fully haplotype-resolved T2T assembly of the African catfish (Clarias gariepinus) combining PacBio HiFi, ONT long reads and Hi-C data.
Data Analysis and Visualisation in Python using matplotlib and pandas
The final version 2 release of our software to detect core genes in eukaryotic genomes
Pipeline to annotate chemosensory related genes in insects
An easy way to create HTML and PDF versions of your resume, and automatically host them on GitHub Pages.
Solutions for Database management Systems - Book by Johannes Gehrke and Raghu Ramakrishnan
Materials for Analyzing Next-Generation Sequencing (ANGUS) course.
No consensus as of yet has been reached for which genome assembler is 'the' best. As a matter of fact, there probably isn't, with different assemblers performing better for specific data sets or objectives. Here I perform de novo assemblies using multiple algorithms as well as reference based assembly of two Anolis distichus females, and compare th
The repository contains my ambitions, qualifications, experiences, skils and achievements.
Config files for my GitHub profile.
GeneBPhylo is a platform that enables for fast and accurate analysis of OrthoFinder results. Evolutionary Genomics Group, Mar Albà, IMIM (PRBB).
Summary of important things for me:
Scripts used for various genomic analyses, including assembly and annotation
Genome Analysis, 10.0 c (1MB462)
convert various features into a GFF-like file for use in genome browsers
React
Typescript
Django
Laravel
Facebook
Microsoft
Google
Alibaba
D3
Tencent