funkhou9 Goto Github PK

650k_chip

Analysis of high-density genotypes in 4 pig breeds using the Affymetrix 650K chip

bgdata

A Suite of Packages for Analysis of Big Genomic Data

blog

My semi-professional website and blog

breedtools

:pig: Tools designed for the interpretation of breed composition from genomic data

comparative-rna-editing

Planning phase for a comparative RNA editing study, in which the "editomes" of various representative species are analyzed

cowplot

edittools

:mag_right: Detection and analysis of RNA editing evidence from VCF data

gnu-make-job-scheduler

A library for GNU make to schedule rules as jobs with qsub or sbatch

gun-sales

Statistical analysis of monthly background checks of gun purchases

gwar

A package for GWA from GBLUP models

ibg_rc_cheatsheet

is-gwas-spark

lab-spring-2018

lbr-sex-interactions

Supplement to "Deciphering sex-specific genetic architectures using local Bayesian regressions"

mirandaparser

Simple parser for miranda (miRNA target prediction software) output

molbio

Simple package for the automation of some experimental data analyses.

mumin

:exclamation: This is a read-only mirror of the CRAN R package repository. MuMIn — Multi-Model Inference

neiss

Data from National Electronic Injury Surveillance System

packages-for-ld

List of existing software that may be useful for global LD calculations

pandoc_resume

The Markdown Resume

pig-editome

Identify putative RNA editing sites across tissues, and apply whole-genome regressions to the study of the genetic architecture of RNA editing

project-genomic_prediction

Early implementation of novel methods for genomic prediction in heterogeneous populations.

project-luad

Class project aimed at predicting lung cancer tumor status from DNA copy number and mRNA expression data

r-novice-gapminder

Introduction to R for non-programmers using gapminder data.

shinydeveloperconference

Materials collected from the First Shiny Developer Conference Palo Alto, CA January 30-31 2016

slurm-knitr-spin

Tool to automatically create a SLURM submission script to spin an R script.

snptools

miscellaneous tools for working with SNP array data

spin-my-script

:scroll: A little bash/R hack to submit R scripts to PBS job schedulers, knitr::spin them, and store the output in an organized way

stt465

STT 465 : Bayesian Statistical Methods (MSU)

survival_explorer