Comments (1)
In hap.py/xcmp I would use this field to show where haplotype vs. direct matching was performed, or to indicate errors. The exact meaning of the field would probably be up to the comparison engine creator, which is why I made it optional.
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Related Issues (16)
- Add links to datasets for benchmarking? HOT 5
- Comparison around confident region boundaries HOT 11
- Records in intermediate VCF format HOT 3
- Standardizing performance metrics output file HOT 4
- Representing and benchmarking variant calls on X, Y, and MT HOT 2
- Intermediate VCF, BD clarification HOT 1
- Broken link in docs HOT 1
- GRCh38 / hg38 stratification BED files HOT 7
- Truth set high-confidence regions and shiftable indels HOT 2
- Benchmarking my dataset HOT 2
- Add metadata to VCF-I header
- CalledProcessError
- Intermediate VCF, decision sub-types (BK) HOT 30
- Intermediate VCF, SUPERLOCUS_ID HOT 7
- Can we call a "superlocus" a "window"? HOT 5
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