Comments (3)
Brought the code in from the codeathon and renamed.
The notebook became https://github.com/ga4gh/fasp-scripts/blob/master/notebooks/search/NCPI_FHIR_approaches.ipynb
Checking status of the production NCPI server.
from fasp-scripts.
This notebook contains a FASP workflow using a FHIR search followed by use of DRS ids. It requires access to controlled access data to complete the WES step.
from fasp-scripts.
Addressed in FHIR Kids First Leukemia notebook
from fasp-scripts.
Related Issues (20)
- Add a notebook to list GA4GH Registry in easily consumable form HOT 4
- Add script that runs parts of a single workflow with different files on different WES implementations HOT 7
- Add notebook to demonstrate DRS resolution and authentication HOT 5
- Use CloudOS and NextFlow to integrate TCGA and GTEx data HOT 3
- Access GTEX PFB data via Search HOT 1
- Check RAS logins for relevant DRS and WES Servers HOT 5
- Update schema for table used by mapping1-manual notebook HOT 6
- Review variations in dbGaP data_dicts
- Add Bulk-FHIR Connectathon examples to Jupyter Notebook HOT 2
- Evaluate 'DRS plus Passport' design for use in results retrieval
- Complete migration of scripts notebooks or other fates HOT 2
- Modify DRSMetaresolver login during initialization HOT 1
- Getting started guide HOT 12
- Create scrambled copy of COPDGene_Phenotypes_drs
- Rename classes to reflect Discovery Search name change to Data Connect HOT 1
- Update DNAStackWESClient for new methods to obtain tokens HOT 2
- Review which scripts would make more sense as Jupyter notebooks HOT 3
- Review FaspScript naming and documentation HOT 5
- Get a working example script for SevenBridges WES HOT 9
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