galaxy-genome-annotation Goto Github PK
Name: Galaxy Genome Annotation
Type: Organization
Bio: Galaxy tools, infrastructure, and related materials focused on Genome Annotation
Name: Galaxy Genome Annotation
Type: Organization
Bio: Galaxy tools, infrastructure, and related materials focused on Genome Annotation
Backup an apollo instance to a git repository
Experimental work for a plugin to allow referencing data from Apollo. For genomes which are re-opened / re-numbered / etc. between drafting and publication, it can be extremely helpful to reference persistent identifiers.
Simple UI for managing Users, Groups, and Organisms in Apollo
Partial, faster reimplementation of Apollo API
compiles copies of the Chado database and dumps the SQL for use in other tools.
:whale: Apollo 2.X Docker Image
Chado database container
:whale: Galaxy Docker Image with Tools for Genome Annotation
Docker image of JBrowse Genome Browser
Docker container for Tripal
:whale::bar_chart::books: Galaxy + Apollo + Chado + Tripal + JBrowse + JBrowse REST API + PostGraphQL + JBrowse GraphQL Experiment all as a docker-compose.yml
DEPRECATED: Merged into https://github.com/galaxyproject/tools-iuc/
Galaxy tools for Genome Annotation
Python library for talking to Apollo API
A Python library for interacting with Chado database
A Python library for interacting with Tripal
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