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gblackshields's Projects

charger icon charger

Characterization of Germline variants

checkqc icon checkqc

CheckQC inspects the content of an Illumina runfolder and determines if it passes a set of quality criteria

ensemblrest icon ensemblrest

A Python interface to the Ensembl REST APIs, biological data at your fingertips.

interlap icon interlap

fast, pure-python interval overlap testing

q10r icon q10r

a simple questionnaire Flask web app

trimgalore icon trimgalore

A wrapper around Cutadapt and FastQC to consistently apply adapter and quality trimming to FastQ files, with extra functionality for RRBS data

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