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almacannot

Simple functions for the reannotation of Almac and Affy probe sets

amld-pytorch-workshop

Introduction to PyTorch Workshop at the AMLD 2019

aoc21

Advent of Code 2021 (only a few problems)

aoc22

building_systems_with_chatgpt

Notebooks from the Deeplearning.ai course "Building Systems with the ChatGPT API".

cameracomp

Simple simulations to test the camera algorithm

cnvtools

Collection of functions for information extraction and analysis of segmented CNV data

competitive-data-science

Materials for "How to Win a Data Science Competition: Learn from Top Kagglers" course

coursera_algorithms

Programs from the "Algorithms" specialization on Coursera.

coxph2table

Simple function to pretty-print univariate and multivariate Cox regressions.

decagon

Graph convolutional neural network for multirelational link prediction

deep-learning-v2-pytorch

Projects and exercises for the latest Deep Learning ND program https://www.udacity.com/course/deep-learning-nanodegree--nd101

deep_ppi

A TensorFlow/Python3 refactoring of the Deep PPI project

dl-workshop-2017

A lightning-fast introduction to some concepts in ML/DL

dl_workshop_2016

Some Org mode notes from the DL workshop in Hinxton

dotfiles

Various dotfiles.

edx_causal_diagrams

Notes from Hernan's edX course on causal diagrams.

gdamisc

Collection of utility R functions for various (mostly bioinformatics-related) purposes

gnn_material

Notebooks with some basic notes on GNNs

greeter

A silly little Python package that says hello.

gsea_tutorial

Slide and code to accompany the gene set enrichment tutorial

kickstart.nvim

A launch point for your personal nvim configuration

learn-github-actions

Temporary repo to familiarise with GitHub Actions

learning_pytorch

Sparse notes and experimens with pytorch

learning_transformers

Sparse notes on Huggingface's transformer library

medicalriskpredictionmodels

Code from the book by Gerds and Kattan

ml_nbdev

Using scikit-learn with nbdev

moa

Code for the MoA challenge

notes

Notes on various topics

obsidian_vault