geneticresources Goto Github PK
Name: Genetics
Type: User
Bio: Resources of genetics, programming and statistics.
Location: Brisbane
Name: Genetics
Type: User
Bio: Resources of genetics, programming and statistics.
Location: Brisbane
Partners Biobank genomics data QC
R scripts from PH525.2x: Data Analysis for Life Sciences: Introduction to Linear Models and Matrix Algebra
PHESANT - PHEnome Scan ANalysis Tool (pheWAS, Mendelian randomisation (MR)-pheWAS etc.) in UK Biobank
The PheWAS R package
Fork of ricopili for development of pipeline for family-based data
A comprehensive update to the PLINK association analysis toolset. Beta testing of the first new version (1.90), focused on speed and memory efficiency improvements, is finishing up. Future development will revolve around critical extensions to the core file format (multiallelic variants, dosage, phase).
Read PLINK BED/BIM/FAM files into R
PolyFun (POLYgenic FUNctionally-informed fine-mapping)
Script to calculate polygenic risk scores in a genotyped sample using GWAS summary statistics from a disease/trait.
Software for estimating correlation of trait effect sizes across populations
aka "Bayesian Methods for Hackers": An introduction to Bayesian methods + probabilistic programming with a computation/understanding-first, mathematics-second point of view. All in pure Python ;)
Pipeline to efficiently process UKbiobank data on lisa cluster
Toolkit for the efficient construction and analysis of polygenic risk scores in R.
Polygenic prediction via continuous shrinkage priors
A software package for calculating, applying, evaluating and plotting the results of polygenic risk scores
Materials and IPython notebooks for "Python for Data Analysis" by Wes McKinney, published by O'Reilly Media
Python code for "Probabilistic Machine learning" book by Kevin Murphy
A collection of various utilities for GWAS summary statistics
Python Data Science Handbook: full text in Jupyter Notebooks
R code for creating Manhattan plots and Q-Q plots for GWAS
A complete tool set for molecular QTL discovery and analysis
A repository that houses example code, applications and teaching material related to QuantEcon
Code repository for R Data Structures and Algorithms, published by Packt
Documentation for R's internal C API
Read-only mirror of R source code from https://svn.r-project.org/R/, updated hourly. See the build instructions on the wiki page.
A flexible tool for meta-analysis
A declarative, efficient, and flexible JavaScript library for building user interfaces.
🖖 Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.
TypeScript is a superset of JavaScript that compiles to clean JavaScript output.
An Open Source Machine Learning Framework for Everyone
The Web framework for perfectionists with deadlines.
A PHP framework for web artisans
Bring data to life with SVG, Canvas and HTML. 📊📈🎉
JavaScript (JS) is a lightweight interpreted programming language with first-class functions.
Some thing interesting about web. New door for the world.
A server is a program made to process requests and deliver data to clients.
Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.
Some thing interesting about visualization, use data art
Some thing interesting about game, make everyone happy.
We are working to build community through open source technology. NB: members must have two-factor auth.
Open source projects and samples from Microsoft.
Google ❤️ Open Source for everyone.
Alibaba Open Source for everyone
Data-Driven Documents codes.
China tencent open source team.