Related Issues (20)
- Clean `tools.binarization` module. HOT 1
- Retain nd2 metadata when converting to tiff in `nd2_to_tiff`. HOT 1
- In tiff_auto3dseg use `gcc.export_settings`. HOT 1
- In tiff_splitt, -I has the opposite behaviour from expected. HOT 1
- Additional options to `tiff_findoof` HOT 3
- Support for 2D fields in czi/nd2_to_tiff HOT 2
- Missing dependencies to czifile and cython packages in setup.py HOT 1
- DFE can merge nuclei, add watershed option in tiff_auto3dseg HOT 1
- Crashed for unknown reasons HOT 1
- Add flexible nuclear selection tool (aim at sub-population selection). HOT 1
- Better error report and format check in fromfish_merge
- URGENT: add compatibility with matplotlib>=3.0
- gpseq_fromfish got stuck at a corrupt image HOT 1
- warnings from gpseq_fromfish HOT 1
- double negations are hard for non-super-humans HOT 1
- Undocumented warnings HOT 1
- Re-factor for better documentation with python `help()`. HOT 1
- Standardize XYZ coordinate noation HOT 1
- G1 filter in `gpseq_fromfish` HOT 1
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