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ecosan327 avatar ecosan327 commented on September 12, 2024

also in the visualization part, I found in general the training result is not as good as the one shown in tutorial web page.
Like the average LFADS filtering R^2 value is lower.
my result :
Screenshot from 2021-11-08 17-18-54

Not sure this is also related to the TSNE problem?

from computation-thru-dynamics.

yanistazi avatar yanistazi commented on September 12, 2024

Try to remove the controller part from the LFADS architecture and you will be able to recover the structural shape of the original tutorial ( you can just set the controller dim and inferred input dim to be 0). It is also a realistic scenario for naturalistic behavior where there is no clear cue
Screenshot 2023-03-14 at 11 24 04 AM

from computation-thru-dynamics.

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