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Name: Pamela M
Type: User
Bio: Hi, This is Pamela.
Location: New York
Name: Pamela M
Type: User
Bio: Hi, This is Pamela.
Location: New York
Making a bar plot which looks a little nicer. Used for a cancer manuscript
Count the total number of reads mapped to each gene in a single cell experiment
Building random forests on GPU
A simple decision tree from Kaggle data
Find gene length and TPM
Calculates the hamming distance between primaries and met samples from the same patient
Use k-means to cluster an image. This is mostly to compress the image
Merge VCF file to create a merged VCF. This was used on AWS to merge 1000+ VCFs
Make a plot which arranges the signatures for more than 1 sample in the ascending order. Also arranges the mutational signature mean. Useful for a manuscript
Normalization using HTSeq count reads from TCGA
Make cbioportal files for viewing
SigProfilerMatrixGenerator creates mutational matrices for all types of somatic mutations. It allows downsizing the generated mutations only to parts for the genome (e.g., exome or a custom BED file). The tool seamlessly integrates with other SigProfiler tools.
TCGA resources
A declarative, efficient, and flexible JavaScript library for building user interfaces.
🖖 Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.
TypeScript is a superset of JavaScript that compiles to clean JavaScript output.
An Open Source Machine Learning Framework for Everyone
The Web framework for perfectionists with deadlines.
A PHP framework for web artisans
Bring data to life with SVG, Canvas and HTML. 📊📈🎉
JavaScript (JS) is a lightweight interpreted programming language with first-class functions.
Some thing interesting about web. New door for the world.
A server is a program made to process requests and deliver data to clients.
Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.
Some thing interesting about visualization, use data art
Some thing interesting about game, make everyone happy.
We are working to build community through open source technology. NB: members must have two-factor auth.
Open source projects and samples from Microsoft.
Google ❤️ Open Source for everyone.
Alibaba Open Source for everyone
Data-Driven Documents codes.
China tencent open source team.