Related Issues (20)
- Error reading GFF produced by Bakta HOT 5
- Panaroo version in bioconda is 1.1.2 HOT 1
- core genome HOT 5
- Using PRANK causes thousands of tmp fastas to be written in working directory HOT 3
- the form of core genes in gene_presence_absence.Rtab HOT 1
- Problem reading data from RefSeq HOT 3
- Question about multithreading during paralog phase HOT 3
- Question: What are the parameters in IMG output? HOT 1
- Meaning of multiple prokka IDs in a cell in presence/absence.csv? HOT 1
- gene names separated by ~~~ HOT 2
- Unmatched aligned gene location on gff and panaroo graph HOT 4
- Error with panaroo-generate-gffs HOT 4
- duplicated clusters with same gene annotations HOT 1
- Error / processing paralogs -> collapse mistranslations HOT 8
- Error while collapsing gene families HOT 1
- How to plot a simple pangenome accumulation curve (numb genes vs numb genomes) using the output of panaroo? HOT 3
- Pangenome graph has single unconnected COGs HOT 1
- Trouble with Panaroo output HOT 1
- panaroo-extract-gene HOT 1
- Question regarding alignment output and -a pan HOT 5
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