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guertinlab's Projects

bigwig icon bigwig

R interface to query UCSC bigWig files

bioc8145 icon bioc8145

BIOC 8145 provides the statistical and programming background as well as introduction to software tools that enable analysis of functional genomics data sets.

fqcomplexity icon fqcomplexity

Calculate necessary raw read depth and complexity of FASTQ files

fqdedup icon fqdedup

Remove PCR duplicates from FASTQ files

kmer_mask_em icon kmer_mask_em

Infer seqOutBias kmer masks via Expectation Maximization

seqoutbias icon seqoutbias

Universal correction of enzymatic sequence bias

trps1_er_analysis icon trps1_er_analysis

Analysis for TRPS1 modulates chromatin accessibility to regulate estrogen receptor (ER) binding and ER target gene expression in luminal breast cancer cells

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