Comments (2)
I had the same problem. Have you solved it?
docker run guigolab/ggsashimi --help
Traceback (most recent call last):
File "/ggsashimi.py", line 8, in <module>
import pysam
File "/usr/local/lib/python3.8/dist-packages/pysam/__init__.py", line 5, in <module>
from pysam.libchtslib import *
ImportError: liblzma-75668d9c.so.0.0.0: cannot open shared object file: No such file or directory
Thanks
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Hi @PedroBarbosa and @ilee-ui, thanks for reporting and follow up with this.
I will shortly make a patch release that fixes the problem.
Best,
Emilio
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Related Issues (20)
- No density plots HOT 1
- invalid contig issue HOT 2
- Error in R HOT 2
- error regarding intersect_introns HOT 17
- IndexError: list index out of range HOT 3
- C stack usage error HOT 3
- Error in FUN(X[[i]], ...) : object 'V1' not found HOT 2
- Individual exon junction cut-off
- Duplicate coverage output HOT 3
- Program hangs / freezes HOT 2
- Help with example HOT 1
- Output PDF HOT 2
- So many junctions and intron-like gaps HOT 2
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- Executing ggsashimi with singularity HOT 4
- How assign color if I am interested only in one sample HOT 1
- ggsashimi can easy read from remote BAMs if allowed to do it
- Duplicate arc appears for each junction using example_run.sh HOT 1
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