Comments (1)
sashagusev
commented on September 17, 2024
Hi Sara, thanks for spotting this, I've incorporated it into the code. However I also recommend double checking how your data is being loaded, the fact that these positions were parsed as strings may be indicative of some other formatting issues. If all entries in the file are numeric they should be read in as numeric by default.
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Related Issues (20)
- Error in layout(lay.gwas): layout matrix must contain at least one reference to each of the values {1 ... 2} Execution halted HOT 1
- Error in check_dataset(d = dataset1, 1) : HOT 2
- LASSO output did not exist HOT 2
- Error in Fusion "coloc" HOT 6
- Failed to download the reference panel! HOT 3
- the same data in LDREF and GWAS summary data
- Using FUSION for Individual-level predictors HOT 2
- LD reference pannel
- COLOC I am getting results with 'NA' HOT 2
- issue with FUSION.post_process.R --omnibus
- A question about drawing HOT 1
- Trying to create own weights : error with TMP HOT 11
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- Single SNP Weights Break FUSION.post_process.R
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- How do I integrate FUSION results from multiple organizations
- LASSO output did not exist
- Expression Prediction
- Compute time with large LD reference panel
- "\--sumstats" is not a valid option, or does not support an argument
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