gwarmstrong Goto Github PK
Name: George Armstrong
Type: User
Company: NVIDIA
George Armstrong's Projects
age-prediction
bioconda-recipes
Conda recipes for the bioconda channel.
biom-format
The Biological Observation Matrix (BIOM) Format Project
bisb-bootcamp-2020
FA2020 Bootcamp course website for the incoming cohort of the Bioinformatics & Systems Biology Ph.D. program
bisb-bootcamp-2021-module09
camisim
CAMISIM: Simulating metagenomes and microbial communities
cse253-final-project
double-pendulum
Double pendulum project from Computational Mechanics in Fall 2016
empress
A fast and scalable phylogenetic tree viewer for microbiome data analysis
faiths-pd-benchmarking
fast-faith-pd-benchmarking
Benchmarking speed and memory for fast calculation of Faith's PD
fastp
An ultra-fast all-in-one FASTQ preprocessor (QC/adapters/trimming/filtering/splitting/merging...)
friendly-guacamole
Microbiome-friendly scikit-learn style data preprocessing and other utilities
gcms-spectra-gnn
gemelli
tensor decomposition for spatiotemporal omics data
gwarmstrong-projects
Web front for some projects I want to display
gwarmstrong.github.io
hmmer
HMMER: biological sequence analysis using profile HMMs
improved-octo-waddle
Balanced parentheses succinct data structure in Python
knausj_talon
Config for talon for Mac, Windows and Linux. Very much in progress.
kraken2
The second version of the Kraken taxonomic sequence classification system
labcontrol
lab manager for plate maps and sequence flows
linearregressionutilities
luigi
Luigi is a Python module that helps you build complex pipelines of batch jobs. It handles dependency resolution, workflow management, visualization etc. It also comes with Hadoop support built in.
microsetta-interface
The Microsetta participant facing user interface
microsetta-private-api
A private microservice to support The Microsetta Initiative
microsetta-public-api
A public microservice to support The Microsetta Initiative
minimap2
A versatile pairwise aligner for genomic and spliced nucleotide sequences
mnist_cnn
Convolutional neural network that learns to recognize digits from the MNIST Dataset
mohawk
Neural nets for microbial sequence classification
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