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Helen G Scott's Projects

comets icon comets

Computation of Microbial Ecosystems in Time and Space

cometspy icon cometspy

Python interface for running COMETS simulations and analyzing the results

csss-2023-ool icon csss-2023-ool

Origin of life project at the Santa Fe Institute Complex Systems Summer School 2023.

csss-2023-plants icon csss-2023-plants

Plant Organogenesis/Cell Cycle Project for the Santa Fe Institute Complex Systems Summer School 2023

escher icon escher

Build, share, and embed visualizations of metabolic pathways.

hot1a3-model icon hot1a3-model

Repository to maintain a genome-scale metabolic model of Alteromonas Macleodii HOT1A3

memote icon memote

memote – the genome-scale metabolic model test suite

optimal_vcmax_r icon optimal_vcmax_r

calculate optimal vcmax in R as in Smith et al. Photosynthetic capacity is optimized to the environment. Ecology Letters.

rgedi icon rgedi

rGEDI: An R Package for NASA's Global Ecosystem Dynamics Investigation (GEDI) Data Visualization and Processing.

sbolvisual icon sbolvisual

SBOL Viz: A web based visualisation tool for Synthetic Biology sequences based on the Synthetic Biology Open Language

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