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Höfer Lab's Projects

abcdez.jl icon abcdez.jl

Approximate Bayesian Computation (ABC) with differential evolution (de) moves and model evidence (Z) estimates.

memocell icon memocell

Bayesian inference of stochastic cellular processes with and without memory in Python.

phy_clo_dy icon phy_clo_dy

Phylogenetic inference from whole genome sequencing data and modeling of clonal dynamics

polyloxpgen icon polyloxpgen

Barcode purging and pgen (probability of generation) calculation for Polylox data. Python version of the original Matlab barcode pipeline.

rpbpbr icon rpbpbr

Retrieving Polylox Barcodes from PacBio Reads (RPBPBR)

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