hylin-work Goto Github PK

3d-prostate-segmentation

Segmentation of prostate from MRI scans

acdc_segmenter

Public code for our submission to the 2017 ACDC Cardiac Segmentation challenge

awesome-healthcare

Curated list of awesome open source healthcare software, libraries, tools and resources.

cardiac-segmentation-with-u-net

U-net、VGGU-net、U-net++ for cardiac-segmentation using Sunnybrook_Cardiac_Data

dltk

Deep Learning Toolkit for Medical Image Analysis

image-quality

Image quality is an open source software library for Image Quality Assessment (IQA).

jupyter-tabnine

Autocompletion with Deep Learning on Jupyter Notebook

keras-unet

Helper package with multiple U-Net implementations in Keras as well as useful utility tools helpful when working with image semantic segmentation tasks. This library and underlying tools come from multiple projects I performed working on semantic segmentation tasks

lvquan18

Work on the Left Ventricle Full Quantification (LVQuan18) Challenge MICCAI 2018.

machine-learning-templates

Template codes and examples for Python machine learning concepts

machine-learning-templates-1

medical-data

medicalnet

Many studies have shown that the performance on deep learning is significantly affected by volume of training data. The MedicalNet project provides a series of 3D-ResNet pre-trained models and relative code.

monai

AI Toolkit for Healthcare Imaging

mriqc

Automated Quality Control and visual reports for Quality Assessment of structural (T1w, T2w) and functional MRI of the brain

multi-scale-attention

Code for our paper "Multi-scale Guided Attention for Medical Image Segmentation"

niftynet

An open-source convolutional neural networks platform for research in medical image analysis and image-guided therapy

niftynetmodelzoo

This repository hosts NiftyNet networks pre-trained for specific tasks

nnunet

promise12_segmentation

Codes that I have written to complete promise12 prostate segmentation competition.

promise12_vnet_pytorch

prostate_segmentation

NCI-ISBI 2013 Challenge - Automated Segmentation of Prostate Structures

python-cheatsheet

Comprehensive Python Cheatsheet

quality-assessment-protocol

Scripts and documentation for the PCP's protocol for assessing data quality.

segmentation_models

Segmentation models with pretrained backbones. Keras and TensorFlow Keras.

spatiotemporalcnn_lvquan

Left ventricle quantification through spatio-temporal CNNs

unet

unet for image segmentation

vnet-tensorflow

Implementation of vnet in tensorflow for medical image segmentation

vnet3d

Prostate MR Image Segmentation 2012