Comments (2)
PR:
#97
from argo-data-submission.
Closing as Done
from argo-data-submission.
Related Issues (20)
- 🐛 Sanity check failure HOT 3
- 🐛 `Decrypt-aspera` add renaming HOT 1
- On-fly Md5sum and filesize generation HOT 1
- Update seq-tools HOT 1
- loose the output file type restriction in tool sanityCheck
- Miss to catch the invalid value in schema validation HOT 1
- Add params `--force` to let the song-score-upload to overwrite the previously uploaded objects HOT 2
- Score parameters not being passed correctly HOT 1
- Update molecular metadata dictionary and template HOT 1
- Update data submission workflow to reflect the dictionary changes in `experiment` HOT 3
- Add check to verify existence of `matchedNormalSubmitterId` HOT 2
- Bump `validate-seqtools` HOT 1
- Add non-committal run HOT 1
- Force mandatory usage of profiles HOT 1
- Add step in sanity check to verify consistent studyID in params and experiment.tsv
- Print the validation report from `seq-tools` in the end
- Update the song/score URLs in configuration file for RDPC Prod/QA/Dev cutover to Cumulus HOT 2
- Update DEV and QA clinical url values HOT 1
- Missing optional fields from pGen
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