idoerg Goto Github PK

ancestral-blocks-reconstruction

anythinguwant

Git tutorial

authorator

bacfinder

Find bacteriocins in bacterial genomes

bacteriocin_paper

All the notebooks and files for the bacteriocin prediction paper

biodig

Biological Database of Image and Genomes

biodigwsc

BioDIG WebService Clients

biopython

Official git repository for Biopython (originally converted from CVS)

boa

bytesizebio

Code from Byte Size Biology Blog

cafa

cafa-evaluator

Evaluation software of the CAFA challenge

cafa-format-check

Format checkers for CAFA predictions files

cafa-sp-targets

CAFA-sp-targets

cafa-toolset

A software package for managing the CAFA community experiment

cafa2-results

Raw results from CAFA 2

cafa_assessment_tool

Precision-Recall based assessment for CAFA

cafa_benchmark

cafa_evaluation

A tool for evaluating CAFA predictions

cafaassess

CAFA Assessment Code

dblp-pub

A scraper that downloads search results from DBLP.

dblp-python

A simple Python wrapper around the DBLP API, currently supporting author search and author and publication lookup.

debias

epitope_tag

Project for internal epitope tagging.

ete

ETE is a Python programming toolkit for building, comparing, annotating, manipulating and visualising trees. It provides both a comprehensive API and a collection of command line tools, including utilities to work with the NCBI taxonomy tree.

friedberg-lab

Scripts originating in Iddo Friedberg's lab and may be of general Interest

gbeer_analysis_pipeline

gbeer_standalone

This is a project based on my earlier gene_block_evolution project.

gene_block_evolution

Code that is under development for my gene block evolution project

genomicislandprediction