Comments (4)
martinsch
commented on July 30, 2024
Sorry for referencing all the existing issues caused by the #'s in the backtrace. I tried to undo that, but I can't...
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stuarteberg
commented on July 30, 2024
Just to make sure this isn't a known issue: what version of h5py are you using? Try this:
$ python -c "import h5py; print h5py.version.version"
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martinsch
commented on July 30, 2024
2.0.0 on the one and 2.0.1 on the other machine.
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stuarteberg
commented on July 30, 2024
h5py 2.0 has serious stability issues when used from multiple threads, which is almost guaranteed to be the source of your segfault. Fortunately, h5py 2.1 was officially released last week. Please upgrade your version of h5py.
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Related Issues (20)
- object information export (with plugins) runs into hdf5 header size limit HOT 2
- Object classification table information HOT 2
- add "clear log" functionality HOT 6
- Export error on output of feature table in Object Classification if frames without objects exist HOT 1
- Update README to instruct how to setup a dev environment and run ilastik from code. HOT 7
- Indicate startup of tiktorch server in local workflow
- Neural Network workflow does not work behind proxy HOT 3
- Revert hacky change mitigating elf overeaching thread limiting
- trainable domain adaptation workflow - model switching not working as expected
- Changing label drawing color preserved during active sessing between projects
- Problems opening tiffs saved in fiji HOT 1
- structured tracking workflow still using --binary_image for second input
- Problem with Batch processing : AssertionError HOT 2
- api for object classification HOT 6
- IndexError: index 1 is out of bounds for axis 0 with size 0 HOT 2
- Pixel + Object Classification workflow: Export Pixel Probabilities doesn't export probabilities? HOT 3
- `TestPixelClassificationGui.test_01_AddRemoveData` hangs everywhere
- Rework ObjectFeaturesPlugin::compute_local
- What is the best way to segment densely-spaced cells? HOT 2
- Discriminate between objects with almost similar contrast HOT 1
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