Ian Light's Projects
Check validity of AncientMetagenomeDir dataset
Postprocessing script for MALTextract.
Repository containing lists of all published ancient metagenome samples (and related)
Config files used to define parameters specific to compute environments at different Institutions
A fully reproducible and state-of-the-art ancient DNA analysis pipeline
scripts for postprocessing of eager outputs
Official code repository for GATK versions 4 and up
Config files for my GitHub profile.
Repository containing data and code employed for the study of the LNBA plague
Repository to host tool-specific module files for the Nextflow DSL2 community!
Testing building mulled containers for multi-requirement tools.
Pipeline for generation of fasta unique capture-probes from a set of genomes
Highly parallelised multi-taxonomic profiling of shotgun short- and long-read metagenomic data
Test data to be used for automated testing with the nf-core pipelines
Tutorial for running the Lieberman Lab's core pipelines, updates for Key-Lab Lieberman-Lab collaboration