imcf Goto Github PK
Name: IMCF
Type: Organization
Bio: Imaging Core Facility, University of Basel
Location: Biozentrum, University of Basel, Switzerland
Name: IMCF
Type: Organization
Bio: Imaging Core Facility, University of Basel
Location: Biozentrum, University of Basel, Switzerland
Code to control the quality of images taken with our microscopes
Official GitHub mirror of the AutoTx intelligent background transfer service.
Bayesian Segmentation of Spatial Transcriptomics Data
Bio-Formats is a Java library for reading and writing data in life sciences image file formats. It is developed by the Open Microscopy Environment (particularly UW-Madison LOCI and Glencoe Software). Bio-Formats is released under the GNU General Public License (GPL); commercial licenses are available from Glencoe Software.
A fast and cross-platform image analysis framework for fluorescence time-lapse microscopy and bioimage informatics.
CellH5 is an HDF5 data format for cell-based assays in high-throughput microscopy, which stores high-dimensional image data along with inter-object relations in graphs.
PowerShell based collector of Citrix metrics for Prometheus (creating a textfile for the windows_exporter).
Confluence REST API (including Cloud) via PowerShell
dvGrid creates an array of tiled microscope stage positions from a list of two positions for Deltavision Softworx.
Commands and Classes for interfacing between Imaris and Fiji
Example project demonstrating how to package ImageJ scripts into a single jar file
Fiji Is Just ImageJ
A wild collection of useful and partially broken scripts for Fiji and TrakEM2
Fiji's Stitching plugins reconstruct big images from tiled input images.
Parsing information from extremely dirty stuff.
Python libraries and tools for running applications on diverse Grids and clusters
Generate maximally distinct sets of colors
The Huygens Remote Manager is an open-source, efficient, multi-user web-based interface to the Huygens software by Scientific Volume Imaging for parallel batch deconvolutions.
The HRM-OMERO connector
A Python-based prometheus metrics collector for the Huygens Remote Manager (HRM).
:crystal_ball::microscope: Installation scripts for setting up the HRM in containers. :truck: :construction: :whale:
Huygens Remote Manager documentation
Set of bash scripts for the automated installation and setup of the Huygens Remote Manager.
Infrastructure to test the Huygens Remote Manager.
An ImageJ / Fiji plugin for multi-channel Hyperstack alignment (registration)
IceImarisConnector is a simple commodity class that eases communication between Bitplane Imaris (http://www.bitplane.com) and MATLAB (http://www.mathworks.com) using the Imaris XT interface (http://www.bitplane.com/go/products/imarisxt).
Contents and Typesetters of the ImageJ User Guide
A declarative, efficient, and flexible JavaScript library for building user interfaces.
🖖 Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.
TypeScript is a superset of JavaScript that compiles to clean JavaScript output.
An Open Source Machine Learning Framework for Everyone
The Web framework for perfectionists with deadlines.
A PHP framework for web artisans
Bring data to life with SVG, Canvas and HTML. 📊📈🎉
JavaScript (JS) is a lightweight interpreted programming language with first-class functions.
Some thing interesting about web. New door for the world.
A server is a program made to process requests and deliver data to clients.
Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.
Some thing interesting about visualization, use data art
Some thing interesting about game, make everyone happy.
We are working to build community through open source technology. NB: members must have two-factor auth.
Open source projects and samples from Microsoft.
Google ❤️ Open Source for everyone.
Alibaba Open Source for everyone
Data-Driven Documents codes.
China tencent open source team.