Comments (2)
Thanks, I can confirm that this is a bug coming from upstream in statsExpressions
:
set.seed(123)
dfEx <-
data.frame(cat1 = rep(c("A", "B"), 10),
cat2 = c(rep("C", 10), rep("D", 10)))
statsExpressions::expr_contingency_tab(
data = dfEx,
x = cat1,
y = cat2,
paired = T,
nboot = 10
)
#> Error in if (const(t, min(1e-08, mean(t, na.rm = TRUE)/1e+06))) {: missing value where TRUE/FALSE needed
Traceback
Error in if (const(t, min(1e-08, mean(t, na.rm = TRUE)/1e+06))) { :
missing value where TRUE/FALSE needed
6.
boot.ci(Boot, conf = conf, type = type)
5.
rcompanion::cohenG(x = x_arg, ci = TRUE, conf = conf.level, type = conf.type,
R = nboot, histogram = FALSE, digits = 5)
4.
eval(lhs, parent, parent)
3.
eval(lhs, parent, parent)
2.
rcompanion::cohenG(x = x_arg, ci = TRUE, conf = conf.level, type = conf.type,
R = nboot, histogram = FALSE, digits = 5)$Global.statistics %>%
rcompanion_cleaner(object = ., estimate.col = "Value") %>%
dplyr::filter(.data = ., Statistic == "g") at helpers_contingency_tabs_expressions.R#245
1.
statsExpressions::expr_contingency_tab(data = dfEx, x = cat1,
y = cat2, paired = T, nboot = 10)
Created on 2019-10-09 by the reprex package (v0.3.0)
Session info
devtools::session_info()
#> - Session info ----------------------------------------------------------
#> setting value
#> version R version 3.6.1 (2019-07-05)
#> os Windows 10 x64
#> system x86_64, mingw32
#> ui RTerm
#> language (EN)
#> collate English_United States.1252
#> ctype English_United States.1252
#> tz Europe/Berlin
#> date 2019-10-09
#>
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#> boot 1.3-23 2019-07-05 [1]
#> broom 0.5.2.9002 2019-08-15 [1]
#> broom.mixed 0.2.4.9000 2019-08-07 [1]
#> broomExtra 0.0.5.9000 2019-09-22 [1]
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#> rstudioapi 0.10 2019-03-19 [1]
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#> sjstats 0.17.6 2019-09-08 [1]
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#> SparseM 1.77 2017-04-23 [1]
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#> [1] C:/Users/inp099/Documents/R/win-library/3.6
#> [2] C:/Program Files/R/R-3.6.1/library
from statsexpressions.
dfEx <-
data.frame(cat1 = rep(c("A", "B"), 10),
cat2 = c(rep("C", 10), rep("D", 10)))
# subtitle
statsExpressions::expr_contingency_tab(
data = dfEx,
x = cat1,
y = cat2,
paired = TRUE,
nboot = 10,
messages = FALSE
)
#> paste(NULL, chi["McNemar"]^2, "(", "1", ") = ", "0.00", ", ",
#> italic("p"), " = ", "1.000", ", ", widehat(italic("g"))["Cohen"],
#> " = ", "0.00", ", CI"["95%"], " [", "-0.27", ", ", "0.39",
#> "]", ", ", italic("n")["pairs"], " = ", 20L)
Created on 2019-12-27 by the reprex package (v0.3.0)
Session info
devtools::session_info()
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#> setting value
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#> survival 3.1-8 2019-12-03 [1]
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#> TH.data 1.0-10 2019-01-21 [1]
#> tibble 2.99.99.9010 2019-12-27 [1]
#> tidyr 1.0.0 2019-09-11 [1]
#> tidyselect 0.2.99.9000 2019-12-24 [1]
#> TMB 1.7.15 2018-11-09 [1]
#> usethis 1.5.1.9000 2019-12-12 [1]
#> vctrs 0.2.99.9000 2019-12-27 [1]
#> withr 2.1.2 2018-03-15 [1]
#> WRS2 1.0-0 2019-06-05 [1]
#> xfun 0.11 2019-11-12 [1]
#> xtable 1.8-4 2019-04-21 [1]
#> yaml 2.2.0 2018-07-25 [1]
#> zeallot 0.1.0 2018-01-28 [1]
#> zip 2.0.4 2019-09-01 [1]
#> zoo 1.8-6 2019-05-28 [1]
#> source
#> CRAN (R 3.5.0)
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#> CRAN (R 3.5.1)
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#> CRAN (R 3.6.1)
#> local
#> Github (bbolker/broom.mixed@46f79ec)
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#> Github (r-lib/cli@0293ae7)
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#> Github (r-lib/desc@61205f6)
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#> CRAN (R 3.6.0)
#> CRAN (R 3.5.3)
#> Github (brodieG/fansi@ab11e9c)
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#> CRAN (R 3.5.2)
#> CRAN (R 3.6.1)
#> CRAN (R 3.6.0)
#> Github (r-lib/generics@c15ac43)
#> CRAN (R 3.6.1)
#> CRAN (R 3.6.0)
#> local
#> CRAN (R 3.6.0)
#> CRAN (R 3.5.0)
#> CRAN (R 3.6.1)
#> CRAN (R 3.6.0)
#> CRAN (R 3.6.1)
#> CRAN (R 3.6.1)
#> local
#> CRAN (R 3.6.0)
#> CRAN (R 3.6.1)
#> CRAN (R 3.6.1)
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#> CRAN (R 3.6.1)
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#> CRAN (R 3.6.0)
#> CRAN (R 3.6.0)
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#> CRAN (R 3.5.0)
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#> CRAN (R 3.5.1)
#> CRAN (R 3.6.1)
#> CRAN (R 3.6.1)
#> CRAN (R 3.5.1)
#> CRAN (R 3.6.0)
#> CRAN (R 3.6.1)
#> CRAN (R 3.5.1)
#> CRAN (R 3.5.2)
#> CRAN (R 3.6.1)
#> Github (easystats/parameters@78e4442)
#> CRAN (R 3.6.1)
#> CRAN (R 3.5.0)
#> local
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#> CRAN (R 3.6.1)
#> CRAN (R 3.6.0)
#> CRAN (R 3.6.1)
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#> CRAN (R 3.6.0)
#> CRAN (R 3.6.2)
#> CRAN (R 3.6.1)
#> CRAN (R 3.6.1)
#> local
#> CRAN (R 3.6.1)
#> CRAN (R 3.6.0)
#> CRAN (R 3.6.0)
#> CRAN (R 3.6.1)
#> CRAN (R 3.6.0)
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#> CRAN (R 3.6.0)
#> Github (r-lib/rlang@ce4f717)
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#> CRAN (R 3.6.1)
#> CRAN (R 3.6.0)
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#> CRAN (R 3.6.1)
#> CRAN (R 3.6.0)
#> CRAN (R 3.6.1)
#> CRAN (R 3.6.1)
#> CRAN (R 3.6.1)
#> CRAN (R 3.6.1)
#> local
#> CRAN (R 3.6.0)
#> CRAN (R 3.6.0)
#> CRAN (R 3.6.1)
#> CRAN (R 3.6.1)
#> CRAN (R 3.5.2)
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#> Github (r-lib/tidyselect@6b8f176)
#> CRAN (R 3.6.1)
#> Github (r-lib/usethis@23dd62c)
#> Github (r-lib/vctrs@fa48942)
#> CRAN (R 3.5.1)
#> R-Forge (R 3.6.0)
#> CRAN (R 3.6.1)
#> CRAN (R 3.5.3)
#> CRAN (R 3.5.1)
#> CRAN (R 3.5.1)
#> CRAN (R 3.6.1)
#> CRAN (R 3.6.0)
#>
#> [1] C:/Users/inp099/Documents/R/win-library/3.6
#> [2] C:/Program Files/R/R-3.6.1/library
from statsexpressions.
Related Issues (20)
- Add CI method attribute from easystats to output data frames
- Remove `n` parameter from `add_expression_col()`?
- Use `{patrick}` for parametrized testing?
- Guidance for using statsExpressions to customize plots?
- In case of `NA`, show it in the label instead of a blank space
- revdep issues with insight HOT 1
- Use `safe_model_parameters()` in `tidy_model_parameters()` instead?
- Avoid duplicating examples
- Don't include CIs in `centrality_description()` by default
- Exact p-value calculation using Wilcoxon rank sum test HOT 1
- DRY test dataset
- Stop converting to factors
- Revep check failure for {insight} HOT 4
- i wonder if `pairwise_comparisons` can do Tukey's HSD? HOT 1
- Use `{roxyglobals}` HOT 1
- Rename `stats_type_switch()` to `extract_stats_type()`
- wilcoxon test default parameters modification HOT 1
- Fix failures on R-devel
- Necessity of patch-level version bumps in dependencies HOT 1
- Introduce parameters to pass extra arguments
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from statsexpressions.